J3_6CAE_024

3D structure

PDB id

6CAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAACC*GGGUGCC*GGAGCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAE|1|1a|G|1002
6CAE|1|1a|G|1003
6CAE|1|1a|A|1004
6CAE|1|1a|A|1005
6CAE|1|1a|C|1006
6CAE|1|1a|C|1007
*
6CAE|1|1a|G|1022
6CAE|1|1a|G|1023
6CAE|1|1a|G|1024
6CAE|1|1a|U|1025
6CAE|1|1a|G|1026
6CAE|1|1a|C|1027
6CAE|1|1a|C|1028
*
6CAE|1|1a|G|1033
6CAE|1|1a|G|1034
6CAE|1|1a|A|1035
6CAE|1|1a|G|1036
6CAE|1|1a|C|1037
6CAE|1|1a|C|1038

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains