J3_6CAQ_016

3D structure

PDB id

6CAQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAACCCG*UGGGGUGCCC*GGGAGCC

Length

24 nucleotides

Bulged bases

6CAQ|1|A|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAQ|1|A|G|1003|||A
6CAQ|1|A|A|1004
6CAQ|1|A|A|1005
6CAQ|1|A|C|1006
6CAQ|1|A|C|1007
6CAQ|1|A|C|1008
6CAQ|1|A|G|1009
*
6CAQ|1|A|U|1020
6CAQ|1|A|G|1021
6CAQ|1|A|G|1022
6CAQ|1|A|G|1023
6CAQ|1|A|G|1024
6CAQ|1|A|U|1025
6CAQ|1|A|G|1026
6CAQ|1|A|C|1027
6CAQ|1|A|C|1028
6CAQ|1|A|C|1029
*
6CAQ|1|A|G|1032
6CAQ|1|A|G|1033
6CAQ|1|A|G|1034
6CAQ|1|A|A|1035
6CAQ|1|A|G|1036
6CAQ|1|A|C|1037
6CAQ|1|A|C|1038

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains