J3_6CAR_018

3D structure

PDB id

6CAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGGAACCC*GGGGUGC*GAGCCC

Length

21 nucleotides

Bulged bases

6CAR|1|A|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAR|1|A|G|1002
6CAR|1|A|G|1003
6CAR|1|A|G|1003|||A
6CAR|1|A|A|1004
6CAR|1|A|A|1005
6CAR|1|A|C|1006
6CAR|1|A|C|1007
6CAR|1|A|C|1008
*
6CAR|1|A|G|1021
6CAR|1|A|G|1022
6CAR|1|A|G|1023
6CAR|1|A|G|1024
6CAR|1|A|U|1025
6CAR|1|A|G|1026
6CAR|1|A|C|1027
*
6CAR|1|A|G|1034
6CAR|1|A|A|1035
6CAR|1|A|G|1036
6CAR|1|A|C|1037
6CAR|1|A|C|1038
6CAR|1|A|C|1039

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains