J3_6CAS_018

3D structure

PDB id

6CAS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGGAACCC*GGGGUGC*GAGCCC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAS|1|A|G|1002
6CAS|1|A|G|1003
6CAS|1|A|G|1003|||A
6CAS|1|A|A|1004
6CAS|1|A|A|1005
6CAS|1|A|C|1006
6CAS|1|A|C|1007
6CAS|1|A|C|1008
*
6CAS|1|A|G|1021
6CAS|1|A|G|1022
6CAS|1|A|G|1023
6CAS|1|A|G|1024
6CAS|1|A|U|1025
6CAS|1|A|G|1026
6CAS|1|A|C|1027
*
6CAS|1|A|G|1034
6CAS|1|A|A|1035
6CAS|1|A|G|1036
6CAS|1|A|C|1037
6CAS|1|A|C|1038
6CAS|1|A|C|1039

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains