J3_6CFJ_077

3D structure

PDB id

6CFJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

6CFJ|1|1A|A|1134

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CFJ|1|1A|G|1101
6CFJ|1|1A|G|1102
6CFJ|1|1A|A|1103
*
6CFJ|1|1A|U|1127
6CFJ|1|1A|U|1128
6CFJ|1|1A|U|1129
6CFJ|1|1A|A|1130
6CFJ|1|1A|A|1131
6CFJ|1|1A|A|1132
6CFJ|1|1A|G|1133
6CFJ|1|1A|A|1134
6CFJ|1|1A|G|1135
6CFJ|1|1A|U|1136
6CFJ|1|1A|G|1137
*
6CFJ|1|1A|C|1146
6CFJ|1|1A|U|1147
6CFJ|1|1A|C|1148
6CFJ|1|1A|A|1149
6CFJ|1|1A|C|1150

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L36