J3_6CZR_020
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUACC*GGGCGAC
- Length
- 29 nucleotides
- Bulged bases
- 6CZR|1|1a|A|953, 6CZR|1|1a|G|954, 6CZR|1|1a|A|956
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_86907.1
- Basepair signature
- cWW-F-F-F-tSW-F-tSH-tSS-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
6CZR|1|1a|G|932
6CZR|1|1a|U|933
6CZR|1|1a|U|934
6CZR|1|1a|U|935
6CZR|1|1a|A|936
6CZR|1|1a|A|937
6CZR|1|1a|U|938
6CZR|1|1a|U|939
6CZR|1|1a|C|940
*
6CZR|1|1a|G|951
6CZR|1|1a|A|952
6CZR|1|1a|A|953
6CZR|1|1a|G|954
6CZR|1|1a|A|955
6CZR|1|1a|A|956
6CZR|1|1a|C|957
6CZR|1|1a|C|958
6CZR|1|1a|U|959
6CZR|1|1a|U|960
6CZR|1|1a|A|961
6CZR|1|1a|C|962
6CZR|1|1a|C|963
*
6CZR|1|1a|G|1202
6CZR|1|1a|G|1203
6CZR|1|1a|G|1204
6CZR|1|1a|C|1205
6CZR|1|1a|G|1206
6CZR|1|1a|A|1207
6CZR|1|1a|C|1208
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1j
- 30S ribosomal protein S10
- Chain 1m
- 30S ribosomal protein S13
- Chain 1n
- 30S ribosomal protein S14 type Z
- Chain 1s
- 30S ribosomal protein S19
Coloring options: