J3_6CZR_040

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CCAUAG*CGC*GUCG

Length

13 nucleotides

Bulged bases

6CZR|1|2B|U|14

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|2B|C|11
6CZR|1|2B|C|12
6CZR|1|2B|A|13
6CZR|1|2B|U|14
6CZR|1|2B|A|15
6CZR|1|2B|G|16
*
6CZR|1|2B|C|68
6CZR|1|2B|G|69
6CZR|1|2B|C|70
*
6CZR|1|2B|G|107
6CZR|1|2B|U|108
6CZR|1|2B|C|109
6CZR|1|2B|G|110

Current chains

Chain 2B

5S Ribosomal RNA

Nearby chains

Chain 20

50S ribosomal protein L27

Chain 2A

Large subunit ribosomal RNA; LSU rRNA

Chain 2S

50S ribosomal protein L18

Chain 2Z

50S ribosomal protein L25