J3_6CZR_063

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6CZR|1|1a|C|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

6CZR|1|1a|C|968
6CZR|1|1a|U|969
6CZR|1|1a|U|970
6CZR|1|1a|G|971
6CZR|1|1a|A|972
6CZR|1|1a|C|973
6CZR|1|1a|A|974
6CZR|1|1a|U|975
*
6CZR|1|1a|A|1027
6CZR|1|1a|C|1028
6CZR|1|1a|A|1029
6CZR|1|1a|G|1030
*
6CZR|1|1a|C|1192
6CZR|1|1a|U|1193
6CZR|1|1a|U|1194
6CZR|1|1a|A|1195
6CZR|1|1a|C|1196
6CZR|1|1a|G|1197

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1n

30S ribosomal protein S14 type Z