J3_6DZI_014

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

CCC*GAUUGAU*AACCG

Length

15 nucleotides

Bulged bases

6DZI|1|A|U|3054, 6DZI|1|A|A|3056, 6DZI|1|A|C|3106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|A|C|3035
6DZI|1|A|C|3036
6DZI|1|A|C|3037
*
6DZI|1|A|G|3051
6DZI|1|A|A|3052
6DZI|1|A|U|3053
6DZI|1|A|U|3054
6DZI|1|A|G|3055
6DZI|1|A|A|3056
6DZI|1|A|U|3057
*
6DZI|1|A|A|3103
6DZI|1|A|A|3104
6DZI|1|A|C|3105
6DZI|1|A|C|3106
6DZI|1|A|G|3107

Current chains

Chain A

23 S rRNA (3119-MER)

Nearby chains

Chain D

50S ribosomal protein L3

Chain O

50S ribosomal protein L17

Chain b

50S ribosomal protein L32