J3_6DZI_015
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- UCCAUAGCG*CAGCGC*GACA
- Length
- 19 nucleotides
- Bulged bases
- 6DZI|1|B|C|12, 6DZI|1|B|U|15
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DZI|1|B|U|11
6DZI|1|B|C|12
6DZI|1|B|C|13
6DZI|1|B|A|14
6DZI|1|B|U|15
6DZI|1|B|A|16
6DZI|1|B|G|17
6DZI|1|B|C|18
6DZI|1|B|G|19
*
6DZI|1|B|C|66
6DZI|1|B|A|67
6DZI|1|B|G|68
6DZI|1|B|C|69
6DZI|1|B|G|70
6DZI|1|B|C|71
*
6DZI|1|B|G|104
6DZI|1|B|A|105
6DZI|1|B|C|106
6DZI|1|B|A|107
Current chains
- Chain B
- 5S RNA (118-MER)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L25
- Chain X
- 50S ribosomal protein L27
Coloring options: