J3_6DZI_040

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|h|G|915
6DZI|1|h|C|916
6DZI|1|h|A|917
6DZI|1|h|C|918
6DZI|1|h|A|919
6DZI|1|h|A|920
6DZI|1|h|G|921
*
6DZI|1|h|C|1326
6DZI|1|h|U|1327
6DZI|1|h|A|1328
6DZI|1|h|G|1329
6DZI|1|h|U|1330
6DZI|1|h|A|1331
6DZI|1|h|A|1332
*
6DZI|1|h|U|1355
6DZI|1|h|G|1356
6DZI|1|h|A|1357
6DZI|1|h|A|1358
6DZI|1|h|U|1359
6DZI|1|h|A|1360
6DZI|1|h|C|1361
6DZI|1|h|G|1362
6DZI|1|h|U|1363
6DZI|1|h|U|1364
6DZI|1|h|C|1365
6DZI|1|h|C|1366
6DZI|1|h|C|1367

Current chains

Chain h

16S rRNA

Nearby chains

Chain 4

30S ribosomal protein S9

Chain Y

Ribosome hibernation promoting factor

Chain p

30S ribosomal protein S7