J3_6DZI_043

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

UGU*AGACUGCC*GGAGGAAGGUG

Length

22 nucleotides

Bulged bases

6DZI|1|h|U|1164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|h|U|1096
6DZI|1|h|G|1097
6DZI|1|h|U|1098
*
6DZI|1|h|A|1136
6DZI|1|h|G|1137
6DZI|1|h|A|1138
6DZI|1|h|C|1139
6DZI|1|h|U|1140
6DZI|1|h|G|1141
6DZI|1|h|C|1142
6DZI|1|h|C|1143
*
6DZI|1|h|G|1155
6DZI|1|h|G|1156
6DZI|1|h|A|1157
6DZI|1|h|G|1158
6DZI|1|h|G|1159
6DZI|1|h|A|1160
6DZI|1|h|A|1161
6DZI|1|h|G|1162
6DZI|1|h|G|1163
6DZI|1|h|U|1164
6DZI|1|h|G|1165

Current chains

Chain h

16S rRNA

Nearby chains

Chain 4

30S ribosomal protein S9

Chain 8

30S ribosomal protein S2

Chain 9

30S ribosomal protein S14

Chain s

30S ribosomal protein S10