J3_6DZI_047

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

UGGAAU*GGAACACCGGUGG*CGG

Length

22 nucleotides

Bulged bases

6DZI|1|h|U|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|h|U|652
6DZI|1|h|G|653
6DZI|1|h|G|654
6DZI|1|h|A|655
6DZI|1|h|A|656
6DZI|1|h|U|657
*
6DZI|1|h|G|693
6DZI|1|h|G|694
6DZI|1|h|A|695
6DZI|1|h|A|696
6DZI|1|h|C|697
6DZI|1|h|A|698
6DZI|1|h|C|699
6DZI|1|h|C|700
6DZI|1|h|G|701
6DZI|1|h|G|702
6DZI|1|h|U|703
6DZI|1|h|G|704
6DZI|1|h|G|705
*
6DZI|1|h|C|712
6DZI|1|h|G|713
6DZI|1|h|G|714

Current chains

Chain h

16S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain n

30S ribosomal protein S6

Chain r

30S ribosomal protein S18 1

Chain t

30S ribosomal protein S11

Chain x

30S ribosomal protein S15