J3_6DZK_004

3D structure

PDB id

6DZK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAG*CGUAG*CAUUAAG

Length

16 nucleotides

Bulged bases

6DZK|1|A|U|853

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZK|1|A|C|806
6DZK|1|A|U|807
6DZK|1|A|A|808
6DZK|1|A|G|809
*
6DZK|1|A|C|839
6DZK|1|A|G|840
6DZK|1|A|U|841
6DZK|1|A|A|842
6DZK|1|A|G|843
*
6DZK|1|A|C|850
6DZK|1|A|A|851
6DZK|1|A|U|852
6DZK|1|A|U|853
6DZK|1|A|A|854
6DZK|1|A|A|855
6DZK|1|A|G|856

Current chains

Chain A

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S8

Chain V

30S ribosomal protein S2