J3_6DZK_015
3D structure
- PDB id
- 6DZK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCACAAG*CUAGUAA*UGAAUACGUUCCC
- Length
- 27 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DZK|1|A|G|915
6DZK|1|A|C|916
6DZK|1|A|A|917
6DZK|1|A|C|918
6DZK|1|A|A|919
6DZK|1|A|A|920
6DZK|1|A|G|921
*
6DZK|1|A|C|1326
6DZK|1|A|U|1327
6DZK|1|A|A|1328
6DZK|1|A|G|1329
6DZK|1|A|U|1330
6DZK|1|A|A|1331
6DZK|1|A|A|1332
*
6DZK|1|A|U|1355
6DZK|1|A|G|1356
6DZK|1|A|A|1357
6DZK|1|A|A|1358
6DZK|1|A|U|1359
6DZK|1|A|A|1360
6DZK|1|A|C|1361
6DZK|1|A|G|1362
6DZK|1|A|U|1363
6DZK|1|A|U|1364
6DZK|1|A|C|1365
6DZK|1|A|C|1366
6DZK|1|A|C|1367
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain Y
- Ribosome hibernation promoting factor
Coloring options: