J3_6DZP_006

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

CGAAAGA*UCAG*UAAG

Length

15 nucleotides

Bulged bases

6DZP|1|A|A|1417

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|C|1413
6DZP|1|A|G|1414
6DZP|1|A|A|1415
6DZP|1|A|A|1416
6DZP|1|A|A|1417
6DZP|1|A|G|1418
6DZP|1|A|A|1419
*
6DZP|1|A|U|1842
6DZP|1|A|C|1843
6DZP|1|A|A|1844
6DZP|1|A|G|1845
*
6DZP|1|A|U|1857
6DZP|1|A|A|1858
6DZP|1|A|A|1859
6DZP|1|A|G|1860

Current chains

Chain A

23S rRNA

Nearby chains