J3_6DZP_009

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

UGCGUCCAUG*CAAG*CGAGGA

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|U|1529
6DZP|1|A|G|1530
6DZP|1|A|C|1531
6DZP|1|A|G|1532
6DZP|1|A|U|1533
6DZP|1|A|C|1534
6DZP|1|A|C|1535
6DZP|1|A|A|1536
6DZP|1|A|U|1537
6DZP|1|A|G|1538
*
6DZP|1|A|C|1634
6DZP|1|A|A|1635
6DZP|1|A|A|1636
6DZP|1|A|G|1637
*
6DZP|1|A|C|1801
6DZP|1|A|G|1802
6DZP|1|A|A|1803
6DZP|1|A|G|1804
6DZP|1|A|G|1805
6DZP|1|A|A|1806

Current chains

Chain A

23S rRNA

Nearby chains