J3_6ENJ_029

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

6ENJ|1|A|U|321, 6ENJ|1|A|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ENJ_029 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.1565

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

6ENJ|1|A|G|297
6ENJ|1|A|G|298
6ENJ|1|A|A|299
6ENJ|1|A|A|300
6ENJ|1|A|G|301
*
6ENJ|1|A|C|316
6ENJ|1|A|G|317
6ENJ|1|A|C|318
6ENJ|1|A|G|319
6ENJ|1|A|A|320
6ENJ|1|A|U|321
6ENJ|1|A|A|322
6ENJ|1|A|C|323
6ENJ|1|A|A|324
6ENJ|1|A|G|325
*
6ENJ|1|A|C|337
6ENJ|1|A|G|338
6ENJ|1|A|U|339
6ENJ|1|A|A|340
6ENJ|1|A|C|341

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24