J3_6ENU_003

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

6ENU|1|A|U|686, 6ENU|1|A|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ENU_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0811

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

6ENU|1|A|U|683
6ENU|1|A|G|684
6ENU|1|A|A|685
6ENU|1|A|U|686
6ENU|1|A|C|687
6ENU|1|A|U|688
6ENU|1|A|A|689
*
6ENU|1|A|U|773
6ENU|1|A|G|774
6ENU|1|A|G|775
*
6ENU|1|A|C|791
6ENU|1|A|A|792
6ENU|1|A|A|793
6ENU|1|A|A|794

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2