J3_6ENU_004

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ENU_004 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0689

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

6ENU|1|A|C|698
6ENU|1|A|A|699
6ENU|1|A|G|700
*
6ENU|1|A|C|732
6ENU|1|A|G|733
6ENU|1|A|A|734
6ENU|1|A|A|735
6ENU|1|A|C|736
*
6ENU|1|A|G|760
6ENU|1|A|A|761
6ENU|1|A|U|762
6ENU|1|A|G|763

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2