J3_6FAI_012
3D structure
- PDB id
- 6FAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UAAC*GGAC*GUUUG
- Length
- 13 nucleotides
- Bulged bases
- 6FAI|1|2|U|1413, 6FAI|1|2|U|1414
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FAI|1|2|U|1335
6FAI|1|2|A|1336
6FAI|1|2|A|1337
6FAI|1|2|C|1338
*
6FAI|1|2|G|1386
6FAI|1|2|G|1387
6FAI|1|2|A|1388
6FAI|1|2|C|1389
*
6FAI|1|2|G|1412
6FAI|1|2|U|1413
6FAI|1|2|U|1414
6FAI|1|2|U|1415
6FAI|1|2|G|1416
Current chains
- Chain 2
- 20S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S5
- Chain Q
- 40S ribosomal protein S16-A
- Chain R
- 40S ribosomal protein S17-A
- Chain U
- 40S ribosomal protein S20
- Chain d
- 40S ribosomal protein S29-A
- Chain g
- Guanine nucleotide-binding protein subunit beta-like protein
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