J3_6FKR_006
3D structure
- PDB id
- 6FKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the dolphin proline-rich antimicrobial peptide Tur1A bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAGGA*UUUAAAGAGUG*CUCACUGG
- Length
- 25 nucleotides
- Bulged bases
- 6FKR|1|1A|A|1088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FKR|1|1A|C|1052
6FKR|1|1A|C|1053
6FKR|1|1A|A|1054
6FKR|1|1A|G|1055
6FKR|1|1A|G|1056
6FKR|1|1A|A|1057
*
6FKR|1|1A|U|1081
6FKR|1|1A|U|1082
6FKR|1|1A|U|1083
6FKR|1|1A|A|1084
6FKR|1|1A|A|1085
6FKR|1|1A|A|1086
6FKR|1|1A|G|1087
6FKR|1|1A|A|1088
6FKR|1|1A|G|1089
6FKR|1|1A|U|1090
6FKR|1|1A|G|1091
*
6FKR|1|1A|C|1100
6FKR|1|1A|U|1101
6FKR|1|1A|C|1102
6FKR|1|1A|A|1103
6FKR|1|1A|C|1104
6FKR|1|1A|U|1105
6FKR|1|1A|G|1106
6FKR|1|1A|G|1107
Current chains
- Chain 1A
- 23S ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L36
- Chain 1Q
- 50S ribosomal protein L16
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