J3_6FT6_017
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAUAGCGAACAAGUACA*UGGAAAG*CUUG
- Length
- 29 nucleotides
- Bulged bases
- 6FT6|1|1|U|343, 6FT6|1|1|A|351, 6FT6|1|2|U|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FT6|1|1|C|340
6FT6|1|1|G|341
6FT6|1|1|A|342
6FT6|1|1|U|343
6FT6|1|1|A|344
6FT6|1|1|G|345
6FT6|1|1|C|346
6FT6|1|1|G|347
6FT6|1|1|A|348
6FT6|1|1|A|349
6FT6|1|1|C|350
6FT6|1|1|A|351
6FT6|1|1|A|352
6FT6|1|1|G|353
6FT6|1|1|U|354
6FT6|1|1|A|355
6FT6|1|1|C|356
6FT6|1|1|A|357
*
6FT6|1|1|U|362
6FT6|1|1|G|363
6FT6|1|1|G|364
6FT6|1|1|A|365
6FT6|1|1|A|366
6FT6|1|1|A|367
6FT6|1|1|G|368
*
6FT6|1|2|C|21
6FT6|1|2|U|22
6FT6|1|2|U|23
6FT6|1|2|G|24
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 2
- 7S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain Y
- 60S ribosomal protein L26-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain j
- 60S ribosomal protein L37-A
- Chain l
- 60S ribosomal protein L39
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