J3_6FT6_022
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCUUCAC*GUAACUGAAU*AGGAAGGAAUA
- Length
- 28 nucleotides
- Bulged bases
- 6FT6|1|1|U|1629, 6FT6|1|1|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FT6|1|1|U|1627
6FT6|1|1|C|1628
6FT6|1|1|U|1629
6FT6|1|1|U|1630
6FT6|1|1|C|1631
6FT6|1|1|A|1632
6FT6|1|1|C|1633
*
6FT6|1|1|G|1640
6FT6|1|1|U|1641
6FT6|1|1|A|1642
6FT6|1|1|A|1643
6FT6|1|1|C|1644
6FT6|1|1|U|1645
6FT6|1|1|G|1646
6FT6|1|1|A|1647
6FT6|1|1|A|1648
6FT6|1|1|U|1649
*
6FT6|1|1|A|1806
6FT6|1|1|G|1807
6FT6|1|1|G|1808
6FT6|1|1|A|1809
6FT6|1|1|A|1810
6FT6|1|1|G|1811
6FT6|1|1|G|1812
6FT6|1|1|A|1813
6FT6|1|1|A|1814
6FT6|1|1|U|1815
6FT6|1|1|A|1816
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
- Chain n
- Pescadillo homolog
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