J3_6FTI_004
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
- Length
- 33 nucleotides
- Bulged bases
- 6FTI|1|u|A|960, 6FTI|1|u|C|962, 6FTI|1|u|G|965, 6FTI|1|u|G|1281
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|A|711
6FTI|1|u|C|712
6FTI|1|u|C|713
*
6FTI|1|u|G|955
6FTI|1|u|A|956
6FTI|1|u|G|957
6FTI|1|u|G|958
6FTI|1|u|G|959
6FTI|1|u|A|960
6FTI|1|u|G|961
6FTI|1|u|C|962
6FTI|1|u|G|963
6FTI|1|u|A|964
6FTI|1|u|G|965
6FTI|1|u|A|966
6FTI|1|u|C|967
6FTI|1|u|C|968
6FTI|1|u|C|969
6FTI|1|u|G|970
6FTI|1|u|U|971
6FTI|1|u|C|972
6FTI|1|u|G|973
6FTI|1|u|C|974
6FTI|1|u|C|975
6FTI|1|u|G|976
*
6FTI|1|u|C|1278
6FTI|1|u|A|1279
6FTI|1|u|C|1280
6FTI|1|u|G|1281
6FTI|1|u|G|1282
6FTI|1|u|G|1283
6FTI|1|u|G|1284
6FTI|1|u|U|1285
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain e
- eL32
- Chain f
- eL33
- Chain r
- eL28
Coloring options: