J3_6FTI_018
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CAAG*CCCAGCCCGUGGAC*GGUAG
- Length
- 23 nucleotides
- Bulged bases
- 6FTI|1|u|C|216, 6FTI|1|u|C|217, 6FTI|1|u|U|224
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|C|196
6FTI|1|u|A|197
6FTI|1|u|A|198
6FTI|1|u|G|199
*
6FTI|1|u|C|215
6FTI|1|u|C|216
6FTI|1|u|C|217
6FTI|1|u|A|218
6FTI|1|u|G|219
6FTI|1|u|C|220
6FTI|1|u|C|221
6FTI|1|u|C|222
6FTI|1|u|G|223
6FTI|1|u|U|224
6FTI|1|u|G|225
6FTI|1|u|G|226
6FTI|1|u|A|227
6FTI|1|u|C|228
*
6FTI|1|u|G|240
6FTI|1|u|G|241
6FTI|1|u|U|242
6FTI|1|u|A|243
6FTI|1|u|G|244
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain 1
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1
- Chain C
- Ribosomal protein L4
- Chain Y
- Ribosomal protein L26
Coloring options: