J3_6FTI_023
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 6FTI|1|u|C|2470, 6FTI|1|u|A|2472, 6FTI|1|u|G|2475
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|A|2451
6FTI|1|u|G|2452
6FTI|1|u|A|2453
6FTI|1|u|U|2454
6FTI|1|u|G|2455
6FTI|1|u|G|2456
*
6FTI|1|u|C|2465
6FTI|1|u|G|2466
6FTI|1|u|U|2467
6FTI|1|u|U|2468
6FTI|1|u|C|2469
6FTI|1|u|C|2470
6FTI|1|u|G|2471
6FTI|1|u|A|2472
6FTI|1|u|A|2473
6FTI|1|u|G|2474
6FTI|1|u|G|2475
6FTI|1|u|G|2476
*
6FTI|1|u|C|2501
6FTI|1|u|G|2502
6FTI|1|u|G|2503
6FTI|1|u|C|2504
6FTI|1|u|C|2505
6FTI|1|u|G|2506
6FTI|1|u|A|2507
6FTI|1|u|U|2508
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain A
- uL2
- Chain G
- eL8
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
- Chain j
- Ribosomal protein L37
- Chain w
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: