J3_6FTI_024

3D structure

PDB id

6FTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GGAGAUG*CAGU*AGGGUGUAAAUCUC

Length

25 nucleotides

Bulged bases

6FTI|1|u|C|2768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTI|1|u|G|2549
6FTI|1|u|G|2550
6FTI|1|u|A|2551
6FTI|1|u|G|2552
6FTI|1|u|A|2553
6FTI|1|u|U|2554
6FTI|1|u|G|2555
*
6FTI|1|u|C|2572
6FTI|1|u|A|2573
6FTI|1|u|G|2574
6FTI|1|u|U|2575
*
6FTI|1|u|A|2757
6FTI|1|u|G|2758
6FTI|1|u|G|2759
6FTI|1|u|G|2760
6FTI|1|u|U|2761
6FTI|1|u|G|2762
6FTI|1|u|U|2763
6FTI|1|u|A|2764
6FTI|1|u|A|2765
6FTI|1|u|A|2766
6FTI|1|u|U|2767
6FTI|1|u|C|2768
6FTI|1|u|U|2769
6FTI|1|u|C|2770

Current chains

Chain u

28S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27

Chain g

eL34