J3_6FTJ_004
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
- Length
- 33 nucleotides
- Bulged bases
- 6FTJ|1|u|A|960, 6FTJ|1|u|C|962, 6FTJ|1|u|G|965, 6FTJ|1|u|G|1281
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTJ|1|u|A|711
6FTJ|1|u|C|712
6FTJ|1|u|C|713
*
6FTJ|1|u|G|955
6FTJ|1|u|A|956
6FTJ|1|u|G|957
6FTJ|1|u|G|958
6FTJ|1|u|G|959
6FTJ|1|u|A|960
6FTJ|1|u|G|961
6FTJ|1|u|C|962
6FTJ|1|u|G|963
6FTJ|1|u|A|964
6FTJ|1|u|G|965
6FTJ|1|u|A|966
6FTJ|1|u|C|967
6FTJ|1|u|C|968
6FTJ|1|u|C|969
6FTJ|1|u|G|970
6FTJ|1|u|U|971
6FTJ|1|u|C|972
6FTJ|1|u|G|973
6FTJ|1|u|C|974
6FTJ|1|u|C|975
6FTJ|1|u|G|976
*
6FTJ|1|u|C|1278
6FTJ|1|u|A|1279
6FTJ|1|u|C|1280
6FTJ|1|u|G|1281
6FTJ|1|u|G|1282
6FTJ|1|u|G|1283
6FTJ|1|u|G|1284
6FTJ|1|u|U|1285
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- Ul30
- Chain e
- eL32
- Chain f
- eL33
- Chain r
- eL28
Coloring options: