J3_6FTJ_027
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UCGGUUG*CCUUCG*CGCACGCCGUUCGUGG
- Length
- 29 nucleotides
- Bulged bases
- 6FTJ|1|u|C|4883, 6FTJ|1|u|C|4937, 6FTJ|1|u|C|4939, 6FTJ|1|u|C|4944, 6FTJ|1|u|G|4945, 6FTJ|1|u|G|4951
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTJ|1|u|U|4748
6FTJ|1|u|C|4749
6FTJ|1|u|G|4750
6FTJ|1|u|G|4751
6FTJ|1|u|U|4752
6FTJ|1|u|U|4753
6FTJ|1|u|G|4754
*
6FTJ|1|u|C|4879
6FTJ|1|u|C|4880
6FTJ|1|u|U|4881
6FTJ|1|u|U|4882
6FTJ|1|u|C|4883
6FTJ|1|u|G|4884
*
6FTJ|1|u|C|4935
6FTJ|1|u|G|4936
6FTJ|1|u|C|4937
6FTJ|1|u|A|4938
6FTJ|1|u|C|4939
6FTJ|1|u|G|4941
6FTJ|1|u|C|4942
6FTJ|1|u|C|4944
6FTJ|1|u|G|4945
6FTJ|1|u|U|4946
6FTJ|1|u|U|4947
6FTJ|1|u|C|4948
6FTJ|1|u|G|4949
6FTJ|1|u|U|4950
6FTJ|1|u|G|4951
6FTJ|1|u|G|4952
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain M
- Ribosomal protein L14
- Chain O
- uL13
- Chain f
- eL33
Coloring options: