J3_6GAW_007

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUCAG*CACAAUCA*UAAAAACG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|AA|C|623
6GAW|1|AA|U|624
6GAW|1|AA|U|625
6GAW|1|AA|C|626
6GAW|1|AA|A|627
6GAW|1|AA|G|628
*
6GAW|1|AA|C|656
6GAW|1|AA|A|657
6GAW|1|AA|C|658
6GAW|1|AA|A|659
6GAW|1|AA|A|660
6GAW|1|AA|U|661
6GAW|1|AA|C|662
6GAW|1|AA|A|663
*
6GAW|1|AA|U|671
6GAW|1|AA|A|672
6GAW|1|AA|A|673
6GAW|1|AA|A|674
6GAW|1|AA|A|675
6GAW|1|AA|A|676
6GAW|1|AA|C|677
6GAW|1|AA|G|678

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AC

Mitochondrial ribosomal protein S24

Chain AE

Mitochondrial ribosomal protein S5

Chain AG

Mitochondrial ribosomal protein S7

Chain AI

28S ribosomal protein S9, mitochondrial

Chain AJ

Mitochondrial ribosomal protein S10

Chain AN

Mitochondrial ribosomal protein S14

Chain Ak

28S ribosomal protein S35, mitochondrial