J3_6GAW_015

3D structure

PDB id

6GAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUUU*AUAUCCACCACAC*GGAG

Length

22 nucleotides

Bulged bases

6GAW|1|AA|U|724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAW|1|AA|C|721
6GAW|1|AA|A|722
6GAW|1|AA|U|723
6GAW|1|AA|U|724
6GAW|1|AA|U|725
*
6GAW|1|AA|A|737
6GAW|1|AA|U|738
6GAW|1|AA|A|739
6GAW|1|AA|U|740
6GAW|1|AA|C|741
6GAW|1|AA|C|742
6GAW|1|AA|A|743
6GAW|1|AA|C|744
6GAW|1|AA|C|745
6GAW|1|AA|A|746
6GAW|1|AA|C|747
6GAW|1|AA|A|748
6GAW|1|AA|C|749
*
6GAW|1|AA|G|778
6GAW|1|AA|G|779
6GAW|1|AA|A|780
6GAW|1|AA|G|781

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AG

Mitochondrial ribosomal protein S7

Chain Ag

Death associated protein 3