J3_6GAW_019
3D structure
- PDB id
- 6GAW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GU*ACUUAUUGAUCC*GAUCAAC
- Length
- 21 nucleotides
- Bulged bases
- 6GAW|1|BA|C|1226, 6GAW|1|BA|U|1231, 6GAW|1|BA|A|1250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GAW|1|BA|G|1182
6GAW|1|BA|U|1183
*
6GAW|1|BA|A|1225
6GAW|1|BA|C|1226
6GAW|1|BA|U|1227
6GAW|1|BA|U|1228
6GAW|1|BA|A|1229
6GAW|1|BA|U|1230
6GAW|1|BA|U|1231
6GAW|1|BA|G|1232
6GAW|1|BA|A|1233
6GAW|1|BA|U|1234
6GAW|1|BA|C|1235
6GAW|1|BA|C|1236
*
6GAW|1|BA|G|1245
6GAW|1|BA|A|1246
6GAW|1|BA|U|1247
6GAW|1|BA|C|1248
6GAW|1|BA|A|1249
6GAW|1|BA|A|1250
6GAW|1|BA|C|1251
Current chains
- Chain BA
- 16S ribosomal RNA, mitochondrial
Nearby chains
- Chain AV
- P-site fMet-tRNAMet, mitochondrial
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain B1
- Mitochondrial ribosomal protein L28
- Chain B6
- bL33m
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BP
- 39S ribosomal protein L15, mitochondrial
Coloring options: