J3_6GAZ_007
3D structure
- PDB id
- 6GAZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUCAG*CACAAUCA*UAAAAACG
- Length
- 22 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GAZ|1|AA|C|623
6GAZ|1|AA|U|624
6GAZ|1|AA|U|625
6GAZ|1|AA|C|626
6GAZ|1|AA|A|627
6GAZ|1|AA|G|628
*
6GAZ|1|AA|C|656
6GAZ|1|AA|A|657
6GAZ|1|AA|C|658
6GAZ|1|AA|A|659
6GAZ|1|AA|A|660
6GAZ|1|AA|U|661
6GAZ|1|AA|C|662
6GAZ|1|AA|A|663
*
6GAZ|1|AA|U|671
6GAZ|1|AA|A|672
6GAZ|1|AA|A|673
6GAZ|1|AA|A|674
6GAZ|1|AA|A|675
6GAZ|1|AA|A|676
6GAZ|1|AA|C|677
6GAZ|1|AA|G|678
Current chains
- Chain AA
- 12S ribosomal RNA, mitochondrial
Nearby chains
- Chain AC
- Mitochondrial ribosomal protein S24
- Chain AE
- Mitochondrial ribosomal protein S5
- Chain AG
- Mitochondrial ribosomal protein S7
- Chain AI
- Mitochondrial ribosomal protein S9
- Chain AJ
- Mitochondrial ribosomal protein S10
- Chain AN
- Mitochondrial ribosomal protein S14
- Chain Ak
- Mitochondrial ribosomal protein S35
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