J3_6GAZ_009

3D structure

PDB id

6GAZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUU*AUAUCCACCACAC*GGAG

Length

22 nucleotides

Bulged bases

6GAZ|1|AA|U|724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GAZ|1|AA|C|721
6GAZ|1|AA|A|722
6GAZ|1|AA|U|723
6GAZ|1|AA|U|724
6GAZ|1|AA|U|725
*
6GAZ|1|AA|A|737
6GAZ|1|AA|U|738
6GAZ|1|AA|A|739
6GAZ|1|AA|U|740
6GAZ|1|AA|C|741
6GAZ|1|AA|C|742
6GAZ|1|AA|A|743
6GAZ|1|AA|C|744
6GAZ|1|AA|C|745
6GAZ|1|AA|A|746
6GAZ|1|AA|C|747
6GAZ|1|AA|A|748
6GAZ|1|AA|C|749
*
6GAZ|1|AA|G|778
6GAZ|1|AA|G|779
6GAZ|1|AA|A|780
6GAZ|1|AA|G|781

Current chains

Chain AA

12S ribosomal RNA, mitochondrial

Nearby chains

Chain AG

Mitochondrial ribosomal protein S7

Chain Ag

Death associated protein 3