J3_6GC6_005
3D structure
- PDB id
- 6GC6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CAAGG*CCCCAAAC*GUG
- Length
- 16 nucleotides
- Bulged bases
- 6GC6|1|A|C|1607, 6GC6|1|A|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GC6|1|A|C|1306
6GC6|1|A|A|1307
6GC6|1|A|A|1308
6GC6|1|A|G|1309
6GC6|1|A|G|1310
*
6GC6|1|A|C|1604
6GC6|1|A|C|1605
6GC6|1|A|C|1606
6GC6|1|A|C|1607
6GC6|1|A|A|1608
6GC6|1|A|A|1609
6GC6|1|A|A|1610
6GC6|1|A|C|1611
*
6GC6|1|A|G|1620
6GC6|1|A|U|1621
6GC6|1|A|G|1622
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: