3D structure

PDB id
6GC6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S ribosomal subunit assembly intermediate state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
CAAGG*CCCCAAAC*GUG
Length
16 nucleotides
Bulged bases
6GC6|1|A|C|1607, 6GC6|1|A|A|1609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GC6|1|A|C|1306
6GC6|1|A|A|1307
6GC6|1|A|A|1308
6GC6|1|A|G|1309
6GC6|1|A|G|1310
*
6GC6|1|A|C|1604
6GC6|1|A|C|1605
6GC6|1|A|C|1606
6GC6|1|A|C|1607
6GC6|1|A|A|1608
6GC6|1|A|A|1609
6GC6|1|A|A|1610
6GC6|1|A|C|1611
*
6GC6|1|A|G|1620
6GC6|1|A|U|1621
6GC6|1|A|G|1622

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L34

Coloring options:

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