J3_6GC7_001

3D structure

PDB id

6GC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GCC*GCGAAAAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC7|1|A|G|30
6GC7|1|A|C|31
6GC7|1|A|C|32
*
6GC7|1|A|G|474
6GC7|1|A|C|475
6GC7|1|A|G|476
6GC7|1|A|A|477
6GC7|1|A|A|478
6GC7|1|A|A|479
6GC7|1|A|A|480
6GC7|1|A|G|481
*
6GC7|1|A|C|509
6GC7|1|A|C|510

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain U

50S ribosomal protein L24