J3_6GC7_010

3D structure

PDB id

6GC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CAAG*CCCAAACC*GGUG

Length

16 nucleotides

Bulged bases

6GC7|1|A|C|1607, 6GC7|1|A|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC7|1|A|C|1306
6GC7|1|A|A|1307
6GC7|1|A|A|1308
6GC7|1|A|G|1309
*
6GC7|1|A|C|1605
6GC7|1|A|C|1606
6GC7|1|A|C|1607
6GC7|1|A|A|1608
6GC7|1|A|A|1609
6GC7|1|A|A|1610
6GC7|1|A|C|1611
6GC7|1|A|C|1612
*
6GC7|1|A|G|1619
6GC7|1|A|G|1620
6GC7|1|A|U|1621
6GC7|1|A|G|1622

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34