J3_6GC8_002

3D structure

PDB id

6GC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate - 50S rec*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAC*GAUAAGC*GAUUUC

Length

16 nucleotides

Bulged bases

6GC8|1|A|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC8|1|A|G|55
6GC8|1|A|A|56
6GC8|1|A|C|57
*
6GC8|1|A|G|70
6GC8|1|A|A|71
6GC8|1|A|U|72
6GC8|1|A|A|73
6GC8|1|A|A|74
6GC8|1|A|G|75
6GC8|1|A|C|76
*
6GC8|1|A|G|110
6GC8|1|A|A|111
6GC8|1|A|U|112
6GC8|1|A|U|113
6GC8|1|A|U|114
6GC8|1|A|C|115

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23

Chain Y

50S ribosomal protein L29