J3_6GC8_017

3D structure

PDB id

6GC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate - 50S rec*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAUGUUG*CAUCAUUUAAAGAAAG*CUCAC

Length

29 nucleotides

Bulged bases

6GC8|1|A|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC8|1|A|G|1055
6GC8|1|A|G|1056
6GC8|1|A|A|1057
6GC8|1|A|U|1058
6GC8|1|A|G|1059
6GC8|1|A|U|1060
6GC8|1|A|U|1061
6GC8|1|A|G|1062
*
6GC8|1|A|C|1076
6GC8|1|A|A|1077
6GC8|1|A|U|1078
6GC8|1|A|C|1079
6GC8|1|A|A|1080
6GC8|1|A|U|1081
6GC8|1|A|U|1082
6GC8|1|A|U|1083
6GC8|1|A|A|1084
6GC8|1|A|A|1085
6GC8|1|A|A|1086
6GC8|1|A|G|1087
6GC8|1|A|A|1088
6GC8|1|A|A|1089
6GC8|1|A|A|1090
6GC8|1|A|G|1091
*
6GC8|1|A|C|1100
6GC8|1|A|U|1101
6GC8|1|A|C|1102
6GC8|1|A|A|1103
6GC8|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains