J3_6GC8_018

3D structure

PDB id

6GC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate - 50S rec*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGGACG*CC*GAAAAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC8|1|A|G|1423
6GC8|1|A|G|1424
6GC8|1|A|G|1425
6GC8|1|A|G|1426
6GC8|1|A|A|1427
6GC8|1|A|C|1428
6GC8|1|A|G|1429
*
6GC8|1|A|C|1564
6GC8|1|A|C|1565
*
6GC8|1|A|G|1568
6GC8|1|A|A|1569
6GC8|1|A|A|1570
6GC8|1|A|A|1571
6GC8|1|A|A|1572
6GC8|1|A|G|1573
6GC8|1|A|C|1574
6GC8|1|A|C|1575

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2