J3_6GSJ_043

3D structure

PDB id

6GSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GGAUG*CAUUUAAAG*CAC

Length

17 nucleotides

Bulged bases

6GSJ|1|1H|A|1084

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSJ|1|1H|G|1055
6GSJ|1|1H|G|1056
6GSJ|1|1H|A|1057
6GSJ|1|1H|U|1058
6GSJ|1|1H|G|1059
*
6GSJ|1|1H|C|1079
6GSJ|1|1H|A|1080
6GSJ|1|1H|U|1081
6GSJ|1|1H|U|1082
6GSJ|1|1H|U|1083
6GSJ|1|1H|A|1084
6GSJ|1|1H|A|1085
6GSJ|1|1H|A|1086
6GSJ|1|1H|G|1087
*
6GSJ|1|1H|C|1102
6GSJ|1|1H|A|1103
6GSJ|1|1H|C|1104

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains