J3_6GSL_056

3D structure

PDB id

6GSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.16 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

6GSL|1|13|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSL|1|13|C|990
6GSL|1|13|U|991
6GSL|1|13|U|992
6GSL|1|13|G|993
6GSL|1|13|A|994
6GSL|1|13|C|995
6GSL|1|13|A|996
6GSL|1|13|U|997
6GSL|1|13|G|998
*
6GSL|1|13|C|1043
6GSL|1|13|A|1044
6GSL|1|13|C|1045
6GSL|1|13|A|1046
6GSL|1|13|G|1047
*
6GSL|1|13|C|1210
6GSL|1|13|U|1211
6GSL|1|13|U|1212
6GSL|1|13|A|1213
6GSL|1|13|C|1214
6GSL|1|13|G|1215

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 5I

30S ribosomal protein S14 type Z