J3_6GXO_022

3D structure

PDB id

6GXO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

6GXO|1|a|U|1025

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXO|1|a|G|1003
6GXO|1|a|A|1004
6GXO|1|a|A|1005
6GXO|1|a|G|1006
*
6GXO|1|a|U|1023
6GXO|1|a|G|1024
6GXO|1|a|U|1025
6GXO|1|a|G|1026
6GXO|1|a|C|1027
6GXO|1|a|C|1028
*
6GXO|1|a|G|1033
6GXO|1|a|G|1034
6GXO|1|a|A|1035
6GXO|1|a|A|1036
6GXO|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14