J3_6GZ3_039
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUCGGUUGGCCUCGGAUAGCCGGUC*GGGUCCGGUGCGGAGUGCCCUUC*GCACCGCACGUUCGUGG
- Length
- 65 nucleotides
- Bulged bases
- 6GZ3|1|A2|C|4718, 6GZ3|1|A2|C|4719, 6GZ3|1|A2|U|4725, 6GZ3|1|A2|U|4827, 6GZ3|1|A2|G|4828, 6GZ3|1|A2|G|4830, 6GZ3|1|A2|G|4833, 6GZ3|1|A2|U|4839, 6GZ3|1|A2|U|4840, 6GZ3|1|A2|A|4896, 6GZ3|1|A2|C|4898, 6GZ3|1|A2|A|4901, 6GZ3|1|A2|C|4902, 6GZ3|1|A2|U|4908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ3|1|A2|C|4709
6GZ3|1|A2|U|4710
6GZ3|1|A2|C|4711
6GZ3|1|A2|G|4712
6GZ3|1|A2|G|4713
6GZ3|1|A2|U|4714
6GZ3|1|A2|U|4715
6GZ3|1|A2|G|4716
6GZ3|1|A2|G|4717
6GZ3|1|A2|C|4718
6GZ3|1|A2|C|4719
6GZ3|1|A2|U|4720
6GZ3|1|A2|C|4721
6GZ3|1|A2|G|4722
6GZ3|1|A2|G|4723
6GZ3|1|A2|A|4724
6GZ3|1|A2|U|4725
6GZ3|1|A2|A|4726
6GZ3|1|A2|G|4727
6GZ3|1|A2|C|4728
6GZ3|1|A2|C|4729
6GZ3|1|A2|G|4730
6GZ3|1|A2|G|4731
6GZ3|1|A2|U|4732
6GZ3|1|A2|C|4733
*
6GZ3|1|A2|G|4819
6GZ3|1|A2|G|4820
6GZ3|1|A2|G|4821
6GZ3|1|A2|U|4822
6GZ3|1|A2|C|4823
6GZ3|1|A2|C|4824
6GZ3|1|A2|G|4825
6GZ3|1|A2|G|4826
6GZ3|1|A2|U|4827
6GZ3|1|A2|G|4828
6GZ3|1|A2|C|4829
6GZ3|1|A2|G|4830
6GZ3|1|A2|G|4831
6GZ3|1|A2|A|4832
6GZ3|1|A2|G|4833
6GZ3|1|A2|U|4834
6GZ3|1|A2|G|4835
6GZ3|1|A2|C|4836
6GZ3|1|A2|C|4837
6GZ3|1|A2|C|4838
6GZ3|1|A2|U|4839
6GZ3|1|A2|U|4840
6GZ3|1|A2|C|4841
*
6GZ3|1|A2|G|4894
6GZ3|1|A2|C|4895
6GZ3|1|A2|A|4896
6GZ3|1|A2|C|4897
6GZ3|1|A2|C|4898
6GZ3|1|A2|G|4899
6GZ3|1|A2|C|4900
6GZ3|1|A2|A|4901
6GZ3|1|A2|C|4902
6GZ3|1|A2|G|4903
6GZ3|1|A2|U|4904
6GZ3|1|A2|U|4905
6GZ3|1|A2|C|4906
6GZ3|1|A2|G|4907
6GZ3|1|A2|U|4908
6GZ3|1|A2|G|4909
6GZ3|1|A2|G|4910
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AE
- ribosomal protein eL6
- Chain AH
- ribosomal protein uL6
- Chain AM
- ribosomal protein eL14
- Chain AO
- ribosomal protein uL13
- Chain AS
- ribosomal protein eL20
- Chain Af
- ribosomal protein eL33
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