J3_6GZQ_020
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GUGGAUGC*GUGAAAAGAAC*GAGUGAAAUAGAGCCUGAAAC
- Length
- 40 nucleotides
- Bulged bases
- 6GZQ|1|A1|U|531, 6GZQ|1|A1|G|535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZQ|1|A1|G|24
6GZQ|1|A1|U|25
6GZQ|1|A1|G|26
6GZQ|1|A1|G|27
6GZQ|1|A1|A|28
6GZQ|1|A1|U|29
6GZQ|1|A1|G|30
6GZQ|1|A1|C|31
*
6GZQ|1|A1|G|502
6GZQ|1|A1|U|503
6GZQ|1|A1|G|504
6GZQ|1|A1|A|505
6GZQ|1|A1|A|506
6GZQ|1|A1|A|507
6GZQ|1|A1|A|508
6GZQ|1|A1|G|509
6GZQ|1|A1|A|510
6GZQ|1|A1|A|511
6GZQ|1|A1|C|512
*
6GZQ|1|A1|G|523
6GZQ|1|A1|A|524
6GZQ|1|A1|G|525
6GZQ|1|A1|U|526
6GZQ|1|A1|G|527
6GZQ|1|A1|A|528
6GZQ|1|A1|A|529
6GZQ|1|A1|A|530
6GZQ|1|A1|U|531
6GZQ|1|A1|A|532
6GZQ|1|A1|G|533
6GZQ|1|A1|A|534
6GZQ|1|A1|G|535
6GZQ|1|A1|C|536
6GZQ|1|A1|C|537
6GZQ|1|A1|U|538
6GZQ|1|A1|G|539
6GZQ|1|A1|A|540
6GZQ|1|A1|A|541
6GZQ|1|A1|A|542
6GZQ|1|A1|C|543
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain P1
- 50S ribosomal protein L20
- Chain R1
- 50S ribosomal protein L22
- Chain T1
- 50S ribosomal protein L24
- Chain a1
- 50S ribosomal protein L32
Coloring options: