J3_6GZQ_028

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CAUCCU*GGGUUGGGC*GCCCAUUAAAG

Length

26 nucleotides

Bulged bases

6GZQ|1|A1|A|2532

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|C|2531
6GZQ|1|A1|A|2532
6GZQ|1|A1|U|2533
6GZQ|1|A1|C|2534
6GZQ|1|A1|C|2535
6GZQ|1|A1|U|2536
*
6GZQ|1|A1|G|2557
6GZQ|1|A1|G|2558
6GZQ|1|A1|G|2559
6GZQ|1|A1|U|2560
6GZQ|1|A1|U|2561
6GZQ|1|A1|G|2562
6GZQ|1|A1|G|2563
6GZQ|1|A1|G|2564
6GZQ|1|A1|C|2565
*
6GZQ|1|A1|G|2571
6GZQ|1|A1|C|2572
6GZQ|1|A1|C|2573
6GZQ|1|A1|C|2574
6GZQ|1|A1|A|2575
6GZQ|1|A1|U|2576
6GZQ|1|A1|U|2577
6GZQ|1|A1|A|2578
6GZQ|1|A1|A|2579
6GZQ|1|A1|A|2580
6GZQ|1|A1|G|2581

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain I1

50S ribosomal protein L13

Chain J1

50S ribosomal protein L14