J3_6GZQ_040

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

ACAAG*CUAGUAA*UGAAUACGU

Length

21 nucleotides

Bulged bases

6GZQ|1|A2|U|1326

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|A|912
6GZQ|1|A2|C|913
6GZQ|1|A2|A|914
6GZQ|1|A2|A|915
6GZQ|1|A2|G|916
*
6GZQ|1|A2|C|1325
6GZQ|1|A2|U|1326
6GZQ|1|A2|A|1327
6GZQ|1|A2|G|1328
6GZQ|1|A2|U|1329
6GZQ|1|A2|A|1330
6GZQ|1|A2|A|1331
*
6GZQ|1|A2|U|1354
6GZQ|1|A2|G|1355
6GZQ|1|A2|A|1356
6GZQ|1|A2|A|1357
6GZQ|1|A2|U|1358
6GZQ|1|A2|A|1359
6GZQ|1|A2|C|1360
6GZQ|1|A2|G|1361
6GZQ|1|A2|U|1362

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain G2

30S ribosomal protein S7

Chain I2

30S ribosomal protein S9