J3_6I7V_029

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUG*CUAACG*CGGACAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_029 not in the Motif Atlas

Homologous match to J3_4WF9_007

Geometric discrepancy: 0.185

The information below is about J3_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_07703.1

Basepair signature

cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F

Number of instances in this motif group

2

Unit IDs

6I7V|1|CA|C|2091
6I7V|1|CA|U|2092
6I7V|1|CA|G|2093
*
6I7V|1|CA|C|2196
6I7V|1|CA|U|2197
6I7V|1|CA|A|2198
6I7V|1|CA|A|2199
6I7V|1|CA|C|2200
6I7V|1|CA|G|2201
*
6I7V|1|CA|C|2222
6I7V|1|CA|G|2223
6I7V|1|CA|G|2224
6I7V|1|CA|A|2225
6I7V|1|CA|C|2226
6I7V|1|CA|A|2227
6I7V|1|CA|G|2228

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2

Chain CH

50S ribosomal protein L9

Chain CY

50S ribosomal protein L28