J3_6I7V_037

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

6I7V|1|DA|U|686, 6I7V|1|DA|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_037 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0721

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

6I7V|1|DA|U|683
6I7V|1|DA|G|684
6I7V|1|DA|A|685
6I7V|1|DA|U|686
6I7V|1|DA|C|687
6I7V|1|DA|U|688
6I7V|1|DA|A|689
*
6I7V|1|DA|U|773
6I7V|1|DA|G|774
6I7V|1|DA|G|775
*
6I7V|1|DA|C|791
6I7V|1|DA|A|792
6I7V|1|DA|A|793
6I7V|1|DA|A|794

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D3

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2